Table 4 |
|||||||||
|
Summary of extreme REHH in 200 Kb regions surrounding non-HLA 'top hits' in AA GWAS |
|||||||||
|
AFR |
MID |
SAS |
EUR |
EAS |
OCE |
AME |
Total groups |
Total haplotypes |
|
|
|
|||||||||
|
rs12185555 |
1 |
1 |
1 |
2 |
0 |
0 |
4 |
5 |
9 |
|
rs12557137 |
0 |
6 |
11 |
1 |
2 |
0 |
0 |
4 |
20 |
|
rs9677779 |
0 |
0 |
2 |
0 |
1 |
1 |
0 |
3 |
4 |
|
rs11800642 |
0 |
0 |
0 |
3 |
2 |
0 |
3 |
3 |
8 |
|
rs3735118 |
0 |
1 |
2 |
0 |
0 |
0 |
3 |
3 |
6 |
|
rs7904001 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
|
rs16959323 |
0 |
1 |
0 |
0 |
2 |
1 |
4 |
4 |
8 |
|
rs5954635 |
1 |
1 |
1 |
3 |
1 |
0 |
0 |
5 |
7 |
|
rs10073652 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
|
rs6640729 |
1 |
2 |
0 |
0 |
0 |
0 |
0 |
2 |
3 |
|
|
|||||||||
|
Total haplotypes |
3 |
12 |
17 |
9 |
8 |
2 |
14 |
||
|
Total loci |
3 |
6 |
5 |
4 |
5 |
2 |
4 |
||
|
|
|||||||||
|
Listed is the number of haplotypes with REHH empirical p-value less than 0.01 and core haplotype frequency greater than 5%. (AFR: sub-Saharan Africa; MID: Middle East; SAS: South Asia; EUR: Europe; EAS: East Asia; OCE: Oceania; AME: Americas) |
|||||||||
|
Klimentidis et al. BMC Evolutionary Biology 2011 11:173 doi:10.1186/1471-2148-11-173 |
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