Table 4

Summary of extreme REHH in 200 Kb regions surrounding non-HLA 'top hits' in AA GWAS

AFR

MID

SAS

EUR

EAS

OCE

AME

Total groups

Total haplotypes


rs12185555

1

1

1

2

0

0

4

5

9

rs12557137

0

6

11

1

2

0

0

4

20

rs9677779

0

0

2

0

1

1

0

3

4

rs11800642

0

0

0

3

2

0

3

3

8

rs3735118

0

1

2

0

0

0

3

3

6

rs7904001

0

0

0

0

0

0

0

0

0

rs16959323

0

1

0

0

2

1

4

4

8

rs5954635

1

1

1

3

1

0

0

5

7

rs10073652

0

0

0

0

0

0

0

0

0

rs6640729

1

2

0

0

0

0

0

2

3


Total haplotypes

3

12

17

9

8

2

14

Total loci

3

6

5

4

5

2

4


Listed is the number of haplotypes with REHH empirical p-value less than 0.01 and core haplotype frequency greater than 5%. (AFR: sub-Saharan Africa; MID: Middle East; SAS: South Asia; EUR: Europe; EAS: East Asia; OCE: Oceania; AME: Americas)

Klimentidis et al. BMC Evolutionary Biology 2011 11:173   doi:10.1186/1471-2148-11-173

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