Figure 2.

Sliding window analysis (400 Kb window with 200 Kb overlapping) of FST percentile in relation to random regions on chromosome 6 for all AFR pairwise comparisons (top panel) and for all EUR pairwise comparisons (middle panel). The lower panel shows all haplotypes in region with REHH p < 0.005, and core frequency greater than 5%, for each group. Thickness of lines is weighted by core haplotype frequency. AFR and AME are not shown in the lower panel because these groups had no qualifying haplotypes. Loci associated with HIV-1 VL set-point are shown as vertical lines (solid for EA, dotted for AA). Locations of genes of interest are shown in the top of the figure. (AFR: sub-Saharan Africa; MID: Middle East; SAS: South Asia; EUR: Europe; EAS: East Asia; OCE: Oceania; AME: Americas)

Klimentidis et al. BMC Evolutionary Biology 2011 11:173   doi:10.1186/1471-2148-11-173
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