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Evidence of association between Nucleosome Occupancy and the Evolution of Transcription Factor Binding Sites in Yeast

Krishna BS Swamy123, Wen-Yi Chu14, Chun-Yi Wang5, Huai-Kuang Tsai126* and Daryi Wang5*

Author Affiliations

1 Institute of Information Science, Academia Sinica, Taipei, 115, Taiwan

2 Bioinformatics Program, Taiwan International Graduate Program, Academia Sinica, Taipei, 115, Taiwan

3 Institute of Biomedical Informatics, National Yang-Ming University, Taiwan

4 Department of Computer Science and Information Engineering, National Taiwan University, Taiwan

5 Biodiversity Research Center, Academia Sinica, Taipei, 115, Taiwan

6 Research Center for Information Technology Innovation, Academia Sinica, Taipei, 115, Taiwan

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BMC Evolutionary Biology 2011, 11:150  doi:10.1186/1471-2148-11-150

Published: 31 May 2011

Additional files

Additional file 1:

Table S1. The list of orthologs and S. cerevisiae specific genes used in this study.

Format: XLSX Size: 41KB Download file

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Additional file 2:

Table S2. The details of TFBSs (that had undergone gain or loss events) used in the site-directed mutagenesis experiment along with their promoter and target gene information.

Format: PDF Size: 63KB Download file

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