Table 3 |
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|
Evolutionary models as selected by MrModeltest v2.3 software for each of the individual gene fragments and for the combined datasets using AIC criteria |
|||
|
Gene/gene data set |
AIC best model fit |
Gamma distribution shape parameter |
Ti/Tv ratio |
|
|
|||
|
g-1 |
HKY+I |
Equal rates |
2.3975 |
|
g-1 * |
HKY+I |
Equal rates |
2.0159 |
|
g-2 |
HKY |
Equal rates |
1.4707 |
|
g-2 * |
HKY+I |
Equal rates |
1.4748 |
|
g-3 |
HKY |
Equal rates |
1.6034 |
|
g-3 * |
HKY |
Equal rates |
1.5926 |
|
g-4 |
GTR |
Equal rates |
n/a |
|
g-5 |
HKY+I |
Equal rates |
0.9858 |
|
g-5 * |
HKY+G |
0.7707 |
1.3060 |
|
g-6 |
HKY |
Equal rates |
1.6034 |
|
g-6 * |
HKY+I |
Equal rates |
1.9435 |
|
g-7 |
HKY |
Equal rates |
2.0482 |
|
g-8 |
K80+G |
0.4266 |
1.2698 |
|
g-9 |
HKY+G |
0.3713 |
1.2549 |
|
g-9 * |
HKY+G |
1.4564 |
1.1334 |
|
g-10 |
HKY+G |
0.5641 |
1.7196 |
|
g-11 |
HKY+G |
0.2939 |
1.1779 |
|
g-11 * |
HKY+G |
0.7744 |
1.2061 |
|
g-12 |
HKY+I |
Equal rates |
1.8313 |
|
g-13 |
HKY+I |
Equal rates |
1.5462 |
|
g-14 |
HKY |
Equal rates |
1.1717 |
|
g-15 |
HKY+I |
Equal rates |
1.1507 |
|
g-16 |
HKY+I |
Equal rates |
1.1031 |
|
g-17 |
HKY+G |
1.0609 |
1.7507 |
|
g-18 |
HKY |
Equal rates |
1.4334 |
|
g-18 * |
HKY |
Equal rates |
1.4658 |
|
g-19 |
HKY+I |
Equal rates |
1.4589 |
|
g-19 * |
HKY+I |
Equal rates |
1.1127 |
|
data set A |
HKY+G |
0.9572 |
1.4147 |
|
data set B |
HKY+G |
0.6449 |
1.4868 |
|
exons |
HKY+G |
0.1595 |
2.0983 |
|
introns |
GTR+G |
1.0173 |
n/a |
|
|
|||
|
* including the outgroup S. nicolai |
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|
Christelová et al. BMC Evolutionary Biology 2011 11:103 doi:10.1186/1471-2148-11-103 |
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