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Table 1
List of plastomes analyzed in this study.
Taxon	GenBank Accession	Plastome size (bp), G/C (%), ENc	Citation

Angiosperms:
Arabidopsis thaliana	NC_000932	154478, 40.3, 47.90	Sato et al. 1999 [68]
Morus indica	NC_008359	158484, 40.5, 47.96	Ravi et al. 2007 [69]
Vitis vinifera	NC_007957	160928, 41.0, 48.64	Jansen et al. 2006 [70]
Nicotiana tabacum	NC_001879	155943, 41.0, 48.79	Shinozaki et al. 1986 [9]
Helianthus annuus	NC_007977	151104, 40.8, 48.56	Timme et al. 2007 [71]
Spinacia oleracea	NC_002202	150725, 40.7, 48.25	Schmitz-Linneweber et al. 2001 [72]
Ranunculus macranthus	NC_008796	155129, 41.4, 49.68	Raubeson et al. 2007 [23]
Agrostis stolonifera	NC_008591	136584, 41.2, 49.76	Saski et al. 2007 [73]
Lemna minor	NC_010109	165955, 40.1, 46.69	Mardanov et al. 2008 [74]
Phalaenopsis aphrodite	NC_007499	148964, 40.4, 47.83	Chang et al. 2006 [75]
Dioscorea elephantipes	NC_009601	152609, 40.5, 47.73	Hansen et al. 2007 [21]
Acorus calamus	NC_007407	153821, 41.7, 49.76	Goremykin et al. 2005 [43]
Drimys granadensis	NC_008456	160604, 41.6, 49.82	Cai et al. 2006 [76]
Liriodendron tulipifera	NC_008326	159886, 41.8, 49.67	Cai et al. 2006 [76]
Illicium oligandrum	NC_009600	148553, 42.1, 50.37	Hansen et al. 2007 [21]
Chloranthus spicatus	NC_009598	157772, 41.6, 49.65	Hansen et al. 2007 [21]
Nymphaea alba	NC_006050	159930, 42.2, 50.68	Goremykin et al. 2004 [77]
Amborella trichopoda	NC_005086	162686, 41.7, 49.66	Goremykin et al. 2003 [78]
Gymnosperms:
Pinus thunbergii	NC_001631	119707, 41.4, 48.98	Wakasugi et al. 1994 [79]
Ephedra equisetina	NC_011954	109518, 37.5, 44.35	Wu et al. 2009 [19]
Gnetum parvifolium	NC_011942	114914, 40.2, 53.80	Wu et al. 2009 [19]
Welwitschia mirabilis	NC_010654	119726, 38.5, 45.79	Wu et al. 2009 [19]
Cycas taitungensis	NC_009618	163403, 41.7, 48.58	Wu et al. 2007 [20]
Ginkgo biloba	various	N. A., 41.8, 48.87	Leebens-Mack et al. 2005 [80]
Monilophytes:
Adiantum capillus-veneris	NC_004766	150568, 44.2, 55.12	Wolf et al. 2003 [37]
Alsophila spinulosa	NC_012818	156661, 43.6, 52.99	Gao et al. 2009 [38]
Angiopteris evecta	NC_008829	153901, 39.2, 44.32	Roper et al. 2007 [27]
Psilotum nudum	NC_003386	138829, 39.3, 45.80	GenBank direct submission
Equisetum arvense	GU191334	133309, 37.2, 41.94	This study
Lycophytes:
Selaginella uncinata	AB197035	144170, 54.3, 58.30	Tsuji et al. 2007 [35]
Selaginella moellendorffii	FJ755183	143780, 51.2, 57.73	GenBank direct submission
Isoetes flaccida	GU191333	145303, 41.9, 48.84	This study
Huperzia lucidula	NC_006861	154373, 40.3, 46.66	Wolf et al. 2005 [39]
Bryophytes:
Anthoceros formosae	NC_004543	161162, 38.2, 42.21	Kugita et al. 2003 [30]
Syntrichia ruralis	FJ546412	122630, 34.5, 35.46	Oliver et al. (in press) [32]
Physcomitrella patens	NC_005087	122890, 35.1, 36.12	Sugiura et al. 2003 [33]
Marchantia polymorpha	NC_001319	121024, 34.0, 35.25	Ohyama et al. 1986 [8]
Charophyte Algae:
Staurastrum punctulatum	NC_008116	157089, 37.1, 38.28	Turmel et al. 2005 [81]
Zygnema circumcarinatum	NC_008117	165372, 39.2, 42.45	Turmel et al. 2005 [81]
Chaetosphaeridium globosum	NC_004115	131183, 35.0, 36.95	Turmel et al. 2002 [82]
Chara vulgaris	NC_008097	184933, 35.7, 39.57	Turmel et al. 2006 [83]
Chlorokybus atmophyticus	NC_008822	152254, 39.1, 43.85	Lemieux et al. 2007 [15]
Mesostigma viride	NC_002186	118360, 34.9, 34.83	Lemieux et al. 2000 [84]

GenBank accession numbers, plastome sizes in base pairs (bp), percent G/C content, effective number of codons (ENc) and original citations are shown.
Karol et al. BMC Evolutionary Biology 2010 10:321 doi:10.1186/1471-2148-10-321

Table 1