Table 3 |
||
|
Names, taxonomic classifications and GenBank accession numbers of the species used in our phylogenetic analyses (asterisks point to partial genome data; percental coverage in the final alignment is indicated for these taxa). |
||
|
Species |
Systematic position |
GenBank accession number |
|
|
||
|
Symsagittifera roscoffensis |
Acoela |
[GenBank: HM237350] |
|
Paratomella rubra*(69%) |
Acoela |
[GenBank: AY228758] |
|
Nemertoderma westbladii*(35%) |
Nemertodermatida |
[GenBank: AY228757] |
|
Urechis caupo |
Echiura |
[GenBank: NC_006379] |
|
Myzostoma seymourcollegiorum*(80%) |
Myzostomida |
[GenBank: EF506562] |
|
Lumbricus terrestris |
Annelida - Clitellata |
[GenBank: NC_001677] |
|
Platynereis dumerilii |
Annelida - "Polychaeta" |
[GenBank: NC_000931] |
|
Microstomum lineare*(49%) |
Platyhelminthes - Turbellaria |
[GenBank: AY228756] |
|
Trichobillharzia regenti |
Platyhelminthes - Trematoda |
[GenBank: NC_009680] |
|
Fasciola hepatica |
Platyhelminthes - Trematoda |
[GenBank: NC_002546] |
|
Microcotyle sebastis |
Platyhelminthes - Monogenea |
[GenBank: NC_009055] |
|
Gyrodactylus salaris |
Platyhelminthes - Monogenea |
[GenBank: NC_008815] |
|
Diphyllobothrium latum |
Platyhelminthes - Cestoda |
[GenBank: NC_008945] |
|
Hymenolepis diminuta |
Platyhelminthes - Cestoda |
[GenBank: NC_002767] |
|
Trichinella spiralis |
Nematoda |
[GenBank: NC_002681] |
|
Xiphinema americanum |
Nematoda |
[GenBank: NC_005928] |
|
Caenorhabditis elegans |
Nematoda |
[GenBank: NC_001328] |
|
Brachionus plicatilis (part 1) |
Rotifera |
[GenBank: NC_010472] |
|
Brachionus plicatilis (part 2) |
Rotifera |
[GenBank:NC_010484] |
|
Leptorhynchoides thecatus |
Acanthocephala |
[GenBank: NC_006892] |
|
Epiperipatus biolleyi |
Onychophora |
[GenBank: NC_009082] |
|
Limulus polyphemus |
Chelicerata - Xiphosura |
[GenBank: NC_003057] |
|
Lithobius forficatus |
Myriapoda - Chilopoda |
[GenBank: NC_002629] |
|
Drosophila yakuba |
Hexapoda - Pterygota |
[GenBank: NC_001322] |
|
Triops cancriformis |
Crustacea - Phyllopoda |
[GenBank: NC_004465] |
|
Squilla mantis |
Crustacea - Malacostraca |
[GenBank: NC_006081] |
|
Priapulus caudatus |
Priapulida |
[GenBank: NC_008557] |
|
Lineus viridis |
Nemertea |
[GenBank: NC_012889] |
|
Phoronis psammophila*(98%) |
Phoronida |
[GenBank: AY368231] |
|
Terebratulina retusa |
Brachiopoda |
[GenBank: NC_000941] |
|
Laqueus rubellus |
Brachiopoda |
[GenBank: NC_002322] |
|
Katharina tunicate |
Mollusca - Polyplacophora |
[GenBank: NC_001636] |
|
Haliotis rubra |
Mollusca - Gastropoda |
[GenBank: NC_005940] |
|
Octopus ocellatus |
Mollusca - Cephalopoda |
[GenBank: NC_007896] |
|
Loxosomella aloxiata |
Entoprocta |
[GenBank: NC_010432] |
|
Flustrellidra hispida |
Bryozoa/Ectoprocta |
[GenBank: NC_008192] |
|
Bugula neritina |
Bryozoa/Entoprocta |
[GenBank: NC_010197] |
|
Paraspadella gotoi |
Chaetognatha |
[GenBank: NC_006083] |
|
Spadella cephaloptera |
Chaetognatha |
[GenBank: NC_006386] |
|
Balanoglossus carnosus |
Hemichordata |
[GenBank: NC_001887] |
|
Branchiostoma floridae |
Chordata - Cephalochordata |
[GenBank: NC_000834] |
|
Myxine glutinosa |
Chordata - Craniata |
[GenBank: NC_002639] |
|
Florometra serratissima |
Echinodermata - Crinoidea |
[GenBank: NC_001878] |
|
Asterias amurensis |
Echinodermata - Asteroidea |
[GenBank: NC_006665] |
|
Cucumaria miniata |
Echinodermata - Holothuroidea |
[GenBank: NC_005929] |
|
Xenoturbella bocki |
Xenoturbellida |
[GenBank: NC_008556] |
|
Oscarella carmela |
Porifera - Demospongia |
[GenBank: NC_009090] |
|
Geodia neptuni |
Porifera - Demospongia |
[GenBank: NC_006990] |
|
Acropora tenuis |
Cnidaria - Anthozoa |
[GenBank: NC_003522] |
|
Aurelia aurita |
Cnidaria - Scyphozoa |
[GenBank: NC_008446] |
|
Trichoplax adhaerens |
Placozoa |
[GenBank: NC_008151] |
|
|
||
|
Mwinyi et al. BMC Evolutionary Biology 2010 10:309 doi:10.1186/1471-2148-10-309 |
||
