Table 3

Names, taxonomic classifications and GenBank accession numbers of the species used in our phylogenetic analyses (asterisks point to partial genome data; percental coverage in the final alignment is indicated for these taxa).

Species

Systematic position

GenBank accession number


Symsagittifera roscoffensis

Acoela

[GenBank: HM237350]

Paratomella rubra*(69%)

Acoela

[GenBank: AY228758]

Nemertoderma westbladii*(35%)

Nemertodermatida

[GenBank: AY228757]

Urechis caupo

Echiura

[GenBank: NC_006379]

Myzostoma seymourcollegiorum*(80%)

Myzostomida

[GenBank: EF506562]

Lumbricus terrestris

Annelida - Clitellata

[GenBank: NC_001677]

Platynereis dumerilii

Annelida - "Polychaeta"

[GenBank: NC_000931]

Microstomum lineare*(49%)

Platyhelminthes - Turbellaria

[GenBank: AY228756]

Trichobillharzia regenti

Platyhelminthes - Trematoda

[GenBank: NC_009680]

Fasciola hepatica

Platyhelminthes - Trematoda

[GenBank: NC_002546]

Microcotyle sebastis

Platyhelminthes - Monogenea

[GenBank: NC_009055]

Gyrodactylus salaris

Platyhelminthes - Monogenea

[GenBank: NC_008815]

Diphyllobothrium latum

Platyhelminthes - Cestoda

[GenBank: NC_008945]

Hymenolepis diminuta

Platyhelminthes - Cestoda

[GenBank: NC_002767]

Trichinella spiralis

Nematoda

[GenBank: NC_002681]

Xiphinema americanum

Nematoda

[GenBank: NC_005928]

Caenorhabditis elegans

Nematoda

[GenBank: NC_001328]

Brachionus plicatilis (part 1)

Rotifera

[GenBank: NC_010472]

Brachionus plicatilis (part 2)

Rotifera

[GenBank:NC_010484]

Leptorhynchoides thecatus

Acanthocephala

[GenBank: NC_006892]

Epiperipatus biolleyi

Onychophora

[GenBank: NC_009082]

Limulus polyphemus

Chelicerata - Xiphosura

[GenBank: NC_003057]

Lithobius forficatus

Myriapoda - Chilopoda

[GenBank: NC_002629]

Drosophila yakuba

Hexapoda - Pterygota

[GenBank: NC_001322]

Triops cancriformis

Crustacea - Phyllopoda

[GenBank: NC_004465]

Squilla mantis

Crustacea - Malacostraca

[GenBank: NC_006081]

Priapulus caudatus

Priapulida

[GenBank: NC_008557]

Lineus viridis

Nemertea

[GenBank: NC_012889]

Phoronis psammophila*(98%)

Phoronida

[GenBank: AY368231]

Terebratulina retusa

Brachiopoda

[GenBank: NC_000941]

Laqueus rubellus

Brachiopoda

[GenBank: NC_002322]

Katharina tunicate

Mollusca - Polyplacophora

[GenBank: NC_001636]

Haliotis rubra

Mollusca - Gastropoda

[GenBank: NC_005940]

Octopus ocellatus

Mollusca - Cephalopoda

[GenBank: NC_007896]

Loxosomella aloxiata

Entoprocta

[GenBank: NC_010432]

Flustrellidra hispida

Bryozoa/Ectoprocta

[GenBank: NC_008192]

Bugula neritina

Bryozoa/Entoprocta

[GenBank: NC_010197]

Paraspadella gotoi

Chaetognatha

[GenBank: NC_006083]

Spadella cephaloptera

Chaetognatha

[GenBank: NC_006386]

Balanoglossus carnosus

Hemichordata

[GenBank: NC_001887]

Branchiostoma floridae

Chordata - Cephalochordata

[GenBank: NC_000834]

Myxine glutinosa

Chordata - Craniata

[GenBank: NC_002639]

Florometra serratissima

Echinodermata - Crinoidea

[GenBank: NC_001878]

Asterias amurensis

Echinodermata - Asteroidea

[GenBank: NC_006665]

Cucumaria miniata

Echinodermata - Holothuroidea

[GenBank: NC_005929]

Xenoturbella bocki

Xenoturbellida

[GenBank: NC_008556]

Oscarella carmela

Porifera - Demospongia

[GenBank: NC_009090]

Geodia neptuni

Porifera - Demospongia

[GenBank: NC_006990]

Acropora tenuis

Cnidaria - Anthozoa

[GenBank: NC_003522]

Aurelia aurita

Cnidaria - Scyphozoa

[GenBank: NC_008446]

Trichoplax adhaerens

Placozoa

[GenBank: NC_008151]


Mwinyi et al. BMC Evolutionary Biology 2010 10:309   doi:10.1186/1471-2148-10-309

Open Data