Table 1

Mitochondrial genome organisation of Symsagittifera roscoffensis.

Gene

Strand

Position

(start - end)

Length (nuc.)

GC-/AT- skew

Start- codon

Stop- codon

Intergenic bp


cox1

+

1 - 1551

1551

0.09/-0.16

GGT

TAA

39

trnF

+

1591 - 1651

61

36

cox2

+

1688 - 2428

741

0.08/-0.02

ATT

TAA

20

trnD

-

2449 - 2499

51

33

trnI

-

2533 - 2594

62

8

cox3

+

2603 - 3394

792

0.17/-0.2

ATT

TAG

1

trnY

+

3396 - 3451

56

7

atp6

+

3459 - 4160

702

0.04/-0.2

ATA

TAA

8

trnV

+

4169 - 4237

69

3

trnQ

-

4241 - 4303

63

0

trnN

+

4304 - 4375

72

19

trnH

+

4395 - 4456

62

5

trnE

+

4462 - 4527

66

27

trnK

+

4555 - 4621

67

2

trnA

+

4624 - 4688

65

0

rrnS (12S)

+

4689 - 5452

764

0.08/0.14

0

trnR

+

5453 - 5514

62

19

nad5

-

5534 - 7309

1776

0.05/-0.15

ATT

TAA

26

trnW

-

7336 - 7400

65

8

trnS-AGY

+

7409 - 7475

67

0

rrnL (16S)

+

7476 - 8417

942

0.27/0.1

0

trnC

-

8418 - 8478

61

4

trnS-UCN

+

8483 - 8546

64

7

trnM

+

8554 - 8602

49

13

nad6

+

8616 - 9095

480

0.01/-0.17

ATC

TAA

10

trnG

+

9106 - 9170

65

3

nad4

+

9174 - 10523

1350

0.12/-0.21

ATG

TAA

137

nad2

-

10661 - 11650

990

-0.07/-0.19

CAT

TAA

70

cytb

-

11721 - 12881

1161

0.03/-0.24

ATT

TAA

36

nad1

-

12918 - 13787

870

0.18/-0.25

ATG

TAA

105

nad4L

-

13893 - 14162

270

0.11/-0.07

ATG

TAA

4

trnP

-

14167 - 14234

68

27

nad3

-

14262 - 14654

393

0.14/-0.21

ATT

TAA

19

trnT

+

14674 - 14739

66

66


The whole molecule consists of 14803 nt; exact gene loci and the number of intergenic base pairs are depicted.

Mwinyi et al. BMC Evolutionary Biology 2010 10:309   doi:10.1186/1471-2148-10-309

Open Data