Table 2

Comparison of null and alternative models by LRT and positively selected sites estimated by Bayes Empirical Bayes.

Test

Contrast

LRT

D.F.

χ2- Probability

Positively selected sites


Relaxed branch-site

M1a × MA

40.520

2

p < 10-8

16, 25, 31, 49, 61, 64, 65, 83, 105, 111, 131,

Strict branch-site

Restricted MA × MA

3.817

1

p < 0.05

164, 167, 188, 194, 195


LRT - likelihood ratio test; D.F - Degrees of freedom.

Sobrinho and de Brito BMC Evolutionary Biology 2010 10:293   doi:10.1186/1471-2148-10-293

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