Table 1

Summary of the GSII sequences characterized in the present study

Taxa

Sequences Obtained

% GC content


Accession Number

Length (bp)

ORF (bp)

Amino Acids

ORF

5' UTR

3' UTR


GSIIE Sequences

Pseudochlorella sp. CCAP211/1A (2)

GQ465769

1486

1137

378

63.32

53.19

55.12

Chlorella luteoviridis UTEX 28

GQ465770

1675

1146

381

56.20

46.27

46.17

Auxenochlorella protothecoides

GQ465771

1621

1161

386

67.96

58.18

67.28

Prototheca zopfii ATCC16527

GQ465772

1632

1158

385

69.26

71.54

72.42


GSIIB Sequences

Pseudochlorella sp. CCAP211/1A (1)

GQ491030

1266

912

303

56.47

n.d.

47.93


Four complete sequences of GSIIE and a portion of one GSIIB were obtained from cDNA for the species listed above. NCBI (GenBank) accession numbers are given. Characteristics of the sequences in terms of nucleotide length (Length), size of open reading frame (ORF), and the length of the predicted amino acid sequences (Amino Acids) are presented. The % GC content of open reading frame (ORF) and the 5'and 3' untranslated regions (UTR) of each transcript are presented.

Ghoshroy et al. BMC Evolutionary Biology 2010 10:198   doi:10.1186/1471-2148-10-198

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