Additional file 2.

Phylogeny of complete L3 sequences. Phylogenetic tree reconstruction for 244 complete L3 sequences. Integers represent transitions when the suffixes "A", "G", "C" or "T" are appended and transversions when the suffixes "a", "g", "c" or "t" are appended. Deletions are indicated by a "d" following the deleted nucleotide position. Underlined nucleotide positions appear more than once in the tree. TMRCAs are represented inside boxes.

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Harich et al. BMC Evolutionary Biology 2010 10:138   doi:10.1186/1471-2148-10-138