Research article
Biochemical pathways analysis of microarray results: regulation of myogenesis in pigs
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* Corresponding author: Marinus FW te Pas marinus.tepas@wur.nl
1 Animal Breeding and Genetics Centre (ABGC), Animal Sciences Group, Wageningen University and Research Centre, Lelystad, The Netherlands
2 ABGC, Wageningen University, Department of Animal Breeding and Genetics, Wageningen, The Netherlands
3 ETH Statistical Animal Genetics Group, ETH Zentrum, Zürich, Switzerland
BMC Developmental Biology 2007, 7:66 doi:10.1186/1471-213X-7-66
Published: 13 June 2007Additional files
Additional File 4:
Networks of Pathways and construction. Shows the relationships and interactions between several pathways (called networks), and shows an example of how these networks can be created.
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Additional File 5:
Software information. This file contains: 1. The PERL script to search the Gene Ontology (GO) database using the list of gene names of a microarray, and 2. The source code and PERL script to search the Kyoto Encyclopaedia of Genes and Genomes (KEGG) database for pathways using this updated gene list.
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Additional File 1:
KEGG data and analyses. Shows all data and first analyses of the genes of the microarrays with pathways reported by the KEGG database
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Additional File 2:
Relevant KEGG pathways. Shows the pathways returned by KEGG with the genes with information on the microarrays indicated as circles around the gene name.
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Additional File 3:
Relevant KEGG pathways. Shows the pathways returned by KEGG with the genes with information on the microarrays indicated as circles around the gene name. Gene expression profiles are included
Format: PPT Size: 307KB Download file
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