Table 1

Transcription factors predicted to interact with phosphoproteins found in MS experiments
BARD1 BRCA1 associated RING domain 1
BMI1 BMI1 polycomb ring finger oncogene
CBX3 Chromobox homolog 3
CTNNB1 Catenin (cadherin-associated protein), beta 1, 88 kDa
HIC1 Hypermethylated in cancer 1
HMGA1 High mobility group AT-hook 1
HNF4A Hepatocyte nuclear factor 4, alpha
ID3 Inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
KDM5B Lysine (K)-specific demethylase 5B
MAZ MYC-associated zinc finger protein (purine-binding transcription factor)
MTA1 Metastasis associated 1
MYC v-myc myelocytomatosis viral oncogene homolog (avian)
NFATC1 Nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
NFKB1 Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
PPP1R13L Protein phosphatase 1, regulatory (inhibitor) subunit 13 like
SIAH2 Seven in absentia homolog 2 (Drosophila)
SMAD3 SMAD family member 3
SOX4 SRY (sex determining region Y)-box 4
SP1 Sp1 transcription factor
SREBF1 Sterol regulatory element binding transcription factor 1
TFDP1 Transcription factor Dp-1
TGFB1I1 Transforming growth factor beta 1 induced transcript 1
TLE1 Transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)
YAP1 Yes-associated protein 1
CBX4 Chromobox homolog 4
E2F4 E2F transcription factor 4, p107/p130-binding

Predicted network of interaction for phosphoproteins found using Ingenuity Pathway Analysis. The list of phosphoproteins found were subjected to Ingenuity Pathway Analysis (IPA) to investigate problable protein interactions for each cellular compartment. Proteins described to be transcription factors were selected to investigate the activation of osteblast related genes by quantitative real-time PCR.

Halcsik et al.

Halcsik et al. BMC Cell Biology 2013 14:47   doi:10.1186/1471-2121-14-47

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