Table 1

Identities of Sam68-interacting proteins.

Swiss-Prot entry name

Accession Number

Gene name

Protein ID

MOWSE Score

p-value

Peptides matched

Sequence Coverage

Nominal mass Mr

Calculated pI value


KHDR1_HUMAN

Q07666

KHDRBS1

Sam68

57

p = 0.036

12

33%

48311

8.73

ROA1_HUMAN

P09651

HNRNPA1

hnRNP A1

90

p < 0.001

10

34%

38936

9.26

ROA2_HUMAN

P22626

HNRNPA2B1

hnRNP A2/B1

100

p < 0.001

11

35%

37464

8.97

HNRPG_HUMAN

P38159

RBMX

hnRNP G

94

p < 0.001

9

20%

42306

10.06

HNRPL_HUMAN

P14866

HNRNPL

hnRNP L

134

p < 0.001

7

19%

60719

6.65


Swiss-Prot names and primary accession numbers for proteins identified by Mascot searches. p-values were calculated using the MOWSE algorithm. Nominal mass (Mr) and isoelectric point (pI) were calculated using the integer mass of the most abundant isotope of each constituent element and the individual ionizing groups in each peptide, respectively.

Rajan et al. BMC Cell Biology 2009 10:82   doi:10.1186/1471-2121-10-82

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