Supplements
Editor-in-Chief Melissa Norton, MD
Biology Editor Penelope Webb, PhD
In-house Editor Danielle Burgess PhD
BMC Bioinformatics publishes selected research, proceedings and collections of thematic reviews as supplements. All articles published in supplements are subject to peer review and are free to access online. The journal also publishes supplements containing meeting abstracts.
Contents of Volume 9 Suppl 4
A Semantic Web for Bioinformatics: Goals, Tools, Systems, Applications
Research
from Seventh International Workshop on Network Tools and Applications in Biology (NETTAB 2007)
Pisa, Italy. 12-15 June 2007
Edited by Paolo Romano, Michael Schroeder, Nicola Cannata and Roberto Marangoni
Introduction
A Semantic Web for bioinformatics: goals, tools, systems, applications Nicola Cannata, Michael Schr der, Roberto Marangoni, Paolo Romano BMC Bioinformatics 2008, 9 (Suppl 4):S1 (25 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Terminologies for text-mining; an experiment in the lipoprotein metabolism domain Dimitra Alexopoulou, Thomas W chter, Laura Pickersgill, Cecilia Eyre, Michael Schroeder BMC Bioinformatics 2008, 9 (Suppl 4):S2 (25 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Ontology-guided data preparation for discovering genotype-phenotype relationships Adrien Coulet, Malika Sma l-Tabbone, Pascale Benlian, Amedeo Napoli, Marie-Dominique Devignes BMC Bioinformatics 2008, 9 (Suppl 4):S3 (25 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Ontology-based, Tissue MicroArray oriented, image centered tissue bank Federica Viti, Ivan Merelli, Andrea Caprera, Barbara Lazzari, Alessandra Stella, Luciano Milanesi BMC Bioinformatics 2008, 9 (Suppl 4):S4 (25 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
AMMO-Prot: amine system project 3D-model finder Ismael Navas-Delgado, Ra l Monta ez, Almudena Pino- ngeles, Aurelio A Moya-Garc a, Jos Luis Urdiales, Francisca S nchez-Jim nez, Jos F Aldana-Montes BMC Bioinformatics 2008, 9 (Suppl 4):S5 (25 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
RDFScape: Semantic Web meets Systems Biology Andrea Splendiani BMC Bioinformatics 2008, 9 (Suppl 4):S6 (25 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Stochastic models for the in silico simulation of synaptic processes Andrea Bracciali, Marcello Brunelli, Enrico Cataldo, Pierpaolo Degano BMC Bioinformatics 2008, 9 (Suppl 4):S7 (25 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
On deducing causality in metabolic networks Chiara Bodei, Andrea Bracciali, Davide Chiarugi BMC Bioinformatics 2008, 9 (Suppl 4):S8 (25 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Reconstructing networks of pathways via significance analysis of their intersections Mirko Francesconi, Daniel Remondini, Nicola Neretti, John M Sedivy, Leon N Cooper, Ettore Verondini, Luciano Milanesi, Gastone Castellani BMC Bioinformatics 2008, 9 (Suppl 4):S9 (25 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
GraphFind: enhancing graph searching by low support data mining techniques Alfredo Ferro, Rosalba Giugno, Misael Mongiov , Alfredo Pulvirenti, Dmitry Skripin, Dennis Shasha BMC Bioinformatics 2008, 9 (Suppl 4):S10 (25 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
PARPST: a PARallel algorithm to find peptide sequence tags Sara Brunetti, Elena Lodi, Elisa Mori, Maria Stella BMC Bioinformatics 2008, 9 (Suppl 4):S11 (25 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Bio-jETI: a service integration, design, and provisioning platform for orchestrated bioinformatics processes Tiziana Margaria, Christian Kubczak, Bernhard Steffen BMC Bioinformatics 2008, 9 (Suppl 4):S12 (25 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
GeneFisher-P: variations of GeneFisher as processes in Bio-jETI Anna-Lena Lamprecht, Tiziana Margaria, Bernhard Steffen, Alexander Sczyrba, Sven Hartmeier, Robert Giegerich BMC Bioinformatics 2008, 9 (Suppl 4):S13 (25 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
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