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BMC Bioinformatics publishes selected collections of research articles, conference proceedings, reviews and reports as supplements, which are free to access online. All articles published in supplements are subject to peer review; meeting abstracts undergo review and selection by the conference. Find out more about publishing a supplement with BioMed Central.

Volume 9 Supplement 4

A Semantic Web for Bioinformatics: Goals, Tools, Systems, Applications

Research

Seventh International Workshop on Network Tools and Applications in Biology (NETTAB 2007)

Pisa, Italy

12-15 June 2007

Edited by Paolo Romano, Michael Schroeder, Nicola Cannata and Roberto Marangoni

Conference website

Introduction   Open Access

A Semantic Web for bioinformatics: goals, tools, systems, applications

Nicola Cannata, Michael Schröder, Roberto Marangoni, Paolo Romano BMC Bioinformatics 2008, 9(Suppl 4):S1 (25 April 2008)

Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Terminologies for text-mining; an experiment in the lipoprotein metabolism domain

Dimitra Alexopoulou, Thomas Wächter, Laura Pickersgill, Cecilia Eyre, Michael Schroeder BMC Bioinformatics 2008, 9(Suppl 4):S2 (25 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Ontology-guided data preparation for discovering genotype-phenotype relationships

Adrien Coulet, Malika Smaïl-Tabbone, Pascale Benlian, Amedeo Napoli, Marie-Dominique Devignes BMC Bioinformatics 2008, 9(Suppl 4):S3 (25 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Ontology-based, Tissue MicroArray oriented, image centered tissue bank

Federica Viti, Ivan Merelli, Andrea Caprera, Barbara Lazzari, Alessandra Stella, Luciano Milanesi BMC Bioinformatics 2008, 9(Suppl 4):S4 (25 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

AMMO-Prot: amine system project 3D-model finder

Ismael Navas-Delgado, Raúl Montañez, Almudena Pino-Ángeles, Aurelio A Moya-García, José Luis Urdiales, Francisca Sánchez-Jiménez, José F Aldana-Montes BMC Bioinformatics 2008, 9(Suppl 4):S5 (25 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

RDFScape: Semantic Web meets Systems Biology

Andrea Splendiani BMC Bioinformatics 2008, 9(Suppl 4):S6 (25 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Stochastic models for the in silico simulation of synaptic processes

Andrea Bracciali, Marcello Brunelli, Enrico Cataldo, Pierpaolo Degano BMC Bioinformatics 2008, 9(Suppl 4):S7 (25 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

On deducing causality in metabolic networks

Chiara Bodei, Andrea Bracciali, Davide Chiarugi BMC Bioinformatics 2008, 9(Suppl 4):S8 (25 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Reconstructing networks of pathways via significance analysis of their intersections

Mirko Francesconi, Daniel Remondini, Nicola Neretti, John M Sedivy, Leon N Cooper, Ettore Verondini, Luciano Milanesi, Gastone Castellani BMC Bioinformatics 2008, 9(Suppl 4):S9 (25 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

GraphFind: enhancing graph searching by low support data mining techniques

Alfredo Ferro, Rosalba Giugno, Misael Mongiovì, Alfredo Pulvirenti, Dmitry Skripin, Dennis Shasha BMC Bioinformatics 2008, 9(Suppl 4):S10 (25 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

PARPST: a PARallel algorithm to find peptide sequence tags

Sara Brunetti, Elena Lodi, Elisa Mori, Maria Stella BMC Bioinformatics 2008, 9(Suppl 4):S11 (25 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Bio-jETI: a service integration, design, and provisioning platform for orchestrated bioinformatics processes

Tiziana Margaria, Christian Kubczak, Bernhard Steffen BMC Bioinformatics 2008, 9(Suppl 4):S12 (25 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

GeneFisher-P: variations of GeneFisher as processes in Bio-jETI

Anna-Lena Lamprecht, Tiziana Margaria, Bernhard Steffen, Alexander Sczyrba, Sven Hartmeier, Robert Giegerich BMC Bioinformatics 2008, 9(Suppl 4):S13 (25 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central


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