From microarray to biology: an integrated experimental, statistical and in silico analysis of how the extracellular matrix modulates the phenotype of cancer cells

doi:10.1186/1471-2105-9-S9-S4

BMC Bioinformatics

Volume 9
Suppl 9

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Dozmorov MG
Kyker KD
Hauser PJ
Saban R
Buethe DD
Dozmorov I
Centola MB
Culkin DJ
Hurst RE

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Kyker KD
Hauser PJ
Saban R
Buethe DD
Dozmorov I
Centola MB
Culkin DJ
Hurst RE
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This article is part of the supplement: Proceedings of the Fifth Annual MCBIOS Conference. Systems Biology: Bridging the Omics .

Proceedings

From microarray to biology: an integrated experimental, statistical and in silico analysis of how the extracellular matrix modulates the phenotype of cancer cells

Mikhail G Dozmorov¹ , Kimberly D Kyker¹ , Paul J Hauser¹ , Ricardo Saban⁴ , David D Buethe¹ , Igor Dozmorov³ , Michael B Centola⁴ , Daniel J Culkin¹ and Robert E Hurst¹^,2

¹Department of Urology, Oklahoma University Health Sciences Centre, Oklahoma City, OK 73104, USA

²Department of Biochemistry and Molecular Biology, Oklahoma University Health Sciences Centre, Oklahoma City, OK 73104, USA

³Microarray Core Facility, Oklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA

⁴Department of Physiology, Oklahoma University Health Sciences Centre, Oklahoma City, OK 73104, USA

author email corresponding author email

BMC Bioinformatics 2008, 9(Suppl 9):S4doi:10.1186/1471-2105-9-S9-S4


Published:	12 August 2008

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Additional file 1:

Supplemental Table S1. Activity of 345 transcription factors in cells grown on Matrigel and on Plastic. Values were obtained as described in Methods and are arbitrary units, but are normalized to protein content and exposure time against an assay standard of biotinylated DNA.

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