BMC Bioinformatics

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This article is part of the supplement: Proceedings of the 10th Bio-Ontologies Special Interest Group Workshop 2007. Ten years past and looking to the future

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Gene Ontology annotations: what they mean and where they come from

David P Hill, Barry Smith, Monica S McAndrews-Hill and Judith A Blake*

BMC Bioinformatics 2008, 9(Suppl 5):S2 doi:10.1186/1471-2105-9-S5-S2

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GOModeler- A tool for hypothesis-testing of functional genomics datasets

Prashanti Manda, McKinley G Freeman, Susan M Bridges, TJ Jankun-Kelly, Bindu Nanduri, Fiona M McCarthy, Shane C Burgess BMC Bioinformatics 2010, 11(Suppl 6):S29 (7 October 2010)

Proceedings   Open Access

Structural and functional-annotation of an equine whole genome oligoarray

Lauren A Bright, Shane C Burgess, Bhanu Chowdhary, Cyprianna E Swiderski, Fiona M McCarthy BMC Bioinformatics 2009, 10(Suppl 11):S8 (8 October 2009)

Research   Open Access

BioGateway: a semantic systems biology tool for the life sciences

Erick Antezana, Ward Blondé, Mikel Egaña, Alistair Rutherford, Robert Stevens, Bernard De Baets, Vladimir Mironov, Martin Kuiper BMC Bioinformatics 2009, 10(Suppl 10):S11 (1 October 2009)

Software   Open Access Highly Accessed

The Cell Cycle Ontology: an application ontology for the representation and integrated analysis of the cell cycle process

Erick Antezana, Mikel Egaña, Ward Blondé, Aitzol Illarramendi, Iñaki Bilbao, Bernard De Baets, Robert Stevens, Vladimir Mironov, Martin Kuiper Genome Biology 2009, 10:R58 (29 May 2009)

A software resource for the analysis of cell cycle related molecular networks.

Review   Open Access

The Plant-Associated Microbe Gene Ontology (PAMGO) Consortium: community development of new Gene Ontology terms describing biological processes involved in microbe-host interactions

Trudy Torto-Alalibo, Candace W Collmer, Michelle Gwinn-Giglio BMC Microbiology 2009, 9(Suppl 1):S1 (19 February 2009)