Table 4

Performance of five-fold cross-validation and three-way data split for the benchmark data sets.

Data set

Measurements

Spec. (%)

Sens. (%)

Acc (%)

MCC

Threshold


RBP86

5-fold CV

90.36

79.95

87.99

0.68

0.36

3-way data split

90.01

79.64

87.65

0.67

0.36


RBP109

5-fold CV

93.88

64.62

89.70

0.58

0.35

3-way data split

94.14

60.63

89.36

0.56

0.35


RBP107

5-fold CV

80.87

77.14

80.44

0.42

0.11

3-way data split

80.65

73.62

79.84

0.40

0.12


Cheng et al. BMC Bioinformatics 2008 9(Suppl 12):S6   doi:10.1186/1471-2105-9-S12-S6

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