Ortholog-based protein-protein interaction prediction and its application to inter-species interactions

doi:10.1186/1471-2105-9-S12-S11

BMC Bioinformatics
Volume 9
Suppl 12

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This article is part of the supplement: Seventh International Conference on Bioinformatics (InCoB2008) .

Research

Ortholog-based protein-protein interaction prediction and its application to inter-species interactions

Sheng-An Lee^*¹^,4 , Cheng-hsiung Chan^*¹ , Chi-Hung Tsai⁵ , Jin-Mei Lai⁶ , Feng-Sheng Wang⁷ , Cheng-Yan Kao⁴^,5 and Chi-Ying F Huang¹^,2^,3^,4

¹Institute of Clinical Medicine, National Yang-Ming University, Taipei 112, Taiwan

²Institute of Bio-Pharmaceutical Sciences, National Yang-Ming University, Taipei 112, Taiwan

³Institute of Biotechnology in Medicine, National Yang-Ming University, Taipei 112, Taiwan

⁴Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan

⁵Institute for Information Industry, Taipei, Taiwan

⁶Department of Life Science, Fu-Jen Catholic University, Taipei Hsien 242, Taiwan

⁷Department of Chemical Engineering, National Chung Cheng University, Chia-Yi 621, Taiwan

author email corresponding author email* Contributed equally

BMC Bioinformatics 2008, 9(Suppl 12):S11doi:10.1186/1471-2105-9-S12-S11


Published:	12 December 2008

Additional files

Additional file 1:

Table S1. The orthologous group coverage among 18 eukaryotic species.

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Additional file 2:

Table S2. Orthologous groups conserved in multiple species.

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Additional file 3:

Table S3. Interlog coverage and contributions for each species.

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Additional file 4:

Table S4. Predicted inter-species interactions between P. falciparum and H. sapiens.

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Additional file 5:

Table S5. Protein-protein interaction data sources.

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