Table 2

methods
category
number of modules
average module size
-log(p)

functional flow pattern
flow-based
14
11.20
5.41
edge-betweenness
hierarchical
43
9.67
4.62
clique percolation
density-based
16
6.94
4.63

Accuracy comparison of the methods for functional module detection in protein interaction networks. The flow-pattern clustering approach had approximately 20% higher accuracy than the other methods.

Cho et al. BMC Bioinformatics 2008 9(Suppl 10):O1   doi:10.1186/1471-2105-9-S10-O1