|
Tight Cluster Results 1 |
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| LymphNode (A2ii in Additional file 1) |
OOB error(%) |
Number of probes |
|
|
||
| BC-Pelp1_Modulation_of_Estrogen_Receptor |
15.38 |
20 |
| Alzheimer's_disease |
17.13 |
23 |
| BC-Deregulation_of_CDK5_in_Alzheimers_Disease |
16.08 |
24 |
| BC-Downregulated_of_MTA_3_in_ER_negative_Breast_Tumors |
12.24 |
26 |
| BC-GATA3_participate_in_activating_the_Th2_cytokine |
11.89 |
33 |
| Nitrogen_metabolism |
14.34 |
40 |
| Gene Symbols of informative genes in this pathway cluster |
||
| MAPK3, PELP1, ESR1, PDZK1, HSPB1, CA12, GLS, IL5, JUNB, GATA3, MAP2K3, MAPT, STH, CSNK1A1 |
||
|
|
||
| p53 (A3i in Additional file 1) |
||
| BC-Pelp1_Modulation_of_Estrogen_Receptor |
13.94 |
20 |
| BC-Downregulated_of_MTA_3_in_ER_negative_Breast_Tumors_ |
15.54 |
26 |
| BC-GATA3_participate_in_activating_the_Th2_cytokine |
13.55 |
33 |
| Nitrogen_metabolism |
17.13 |
40 |
| BC-CARM1_and_Regulation_of_the_Estrogen_Receptor |
14.34 |
54 |
| Gene Symbols of informative genes in this pathway cluster |
||
| MAPK3, PELP1, ESR1, PDZK1, HSPB1, HDAC2, CA12, GLS, IL5, JUNB, GATA3, MAP2K3 |
||
|
The bold pathways are those with low OOB error rates | ||
Pang and Zhao BMC Bioinformatics 2008 9:87 doi:10.1186/1471-2105-9-87 |
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