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Open AccessHighly AccessResearch article

Meta-analysis of breast cancer microarray studies in conjunction with conserved cis-elements suggest patterns for coordinate regulation

David D Smith1 email, Pål Sætrom2,4 email, Ola Snøve Jr2,5 email, Cathryn Lundberg3 email, Guillermo E Rivas3 email, Carlotta Glackin3 email and Garrett P Larson3 email

Division of Information Sciences, City of Hope National Medical Center, Duarte, CA 91010, USA

Department o f Molecular Biology, City of Hope and Beckman Research Institute, Duarte, CA 91010, USA

Division of Molecular Medicine, City of Hope and Beckman Research Institute, Duarte, CA 91010, USA

Department of Computer and Information Science, Norwegian University of Science and Technology, NO-7489 Trondheim, Norway

Department of Cancer Research and Molecular Medicine, Norwegian University of Science and Technology, NO-7489 Trondheim, Norway

author email corresponding author email

BMC Bioinformatics 2008, 9:63doi:10.1186/1471-2105-9-63

Published: 28 January 2008

Additional files

Additional file 1:

Top 1% and Top 5% Gene Sets from Meta-Analysis. The data provided represents the top 1% and 5% up- and down-regulated genes among the studies considered in our meta-analysis. The data are sorted by S/N, which is analogous to an estimate of average expression per study.

Format: XLS Size: 357KB Download file

This file can be viewed with: Microsoft Excel Viewer


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