Figure 6.

Analyses of aligned sequences. XplorSeq provides GUI-based access to several command-line programs used for phylogenetic analysis of multiple sequence alignments, including A-D) several commonly used programs from the phylip package [37]; E) RAxML for maximum-likelihood phylogenetic inference; F) sortx, for rapid clustering of sequences into OTUs; and G) biodiv for estimation of biodiversity indices through resampling statistics.

Frank BMC Bioinformatics 2008 9:420   doi:10.1186/1471-2105-9-420
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