|
Resolution: standard / high Figure 2.
Performance results. A) The speedup increases linearly with the number of used cores. Setting more workers
(5) than existing cores (4) does not improve the results. B) The (super linear) speedup exceeds the theoretical maximum of number of processing
units due to faster tasks. C) With a conservative average load of 15% for other tasks, the computer is overloaded
when R/parallel claims 100%. By reducing the percentage for R/parallel (with an optional
argument) we can recover responsiveness and keep working on other tasks while running
our calculations.
Vera et al. BMC Bioinformatics 2008 9:390 doi:10.1186/1471-2105-9-390 |