Table 3 |
|||
|
Localization prediction results for unknown proteins |
|||
|
unknown |
predicted subcellular localization |
confidence |
|
|
|
|||
|
ID in MIPS |
description |
||
|
|
|||
|
YER070W |
755 |
mitochondria |
90.7 |
|
YJR033C |
750 |
nucleus |
215.9 |
|
YJR091C |
722 |
integral membrane/endomembranes |
49.6 |
|
YJR091C |
725 |
cytoplasm |
213.2 |
|
YJR091C |
770 |
vacuole |
52.1 |
|
YLL038C |
705 |
bud |
50.0 |
|
YML023C |
722 |
integral membrane/endomembranes |
119.8 |
|
YML023C |
750 |
nucleus |
191.3 |
|
YNL293W |
705 |
bud |
81.0 |
|
YNL293W |
715 |
cell periphery |
69.6 |
|
YNL293W |
730 |
cytoskeleton |
54.3 |
|
YOR076C |
750.05 |
nucleolus |
215.8 |
|
YOR076C |
755 |
mitochondria |
60.3 |
|
YOR231W |
705 |
bud |
168.7 |
|
YOR231W |
715 |
cell periphery |
58.0 |
|
YOR231W |
730 |
cytoskeleton |
45.3 |
|
YOR231W |
750 |
nucleus |
88.0 |
|
|
|||
|
For each unknown protein, our probabilistic approach predicted a set of subcellular components with the prediction confidence, log λ. The prediction results, whose confidence is greater than 40, were listed. A protein can have more than one subcellular component predicted with different confidence rates. |
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|
Cho et al. BMC Bioinformatics 2008 9:382 doi:10.1186/1471-2105-9-382 |
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