Identification and correction of abnormal, incomplete and mispredicted proteins in public databases

doi:10.1186/1471-2105-9-353

BMC Bioinformatics

Volume 9

Viewing options:

Abstract
Full text
PDF (443KB)
Additional files

Associated material:

Related literature:

Articles citing this article
on Google Scholar
on ISI Web of Science
on PubMed Central
Other articles by authors
on Google Scholar

Nagy A
Hegyi H
Farkas K
Tordai H
Kozma E
Bányai L
Patthy L

on PubMed

Nagy A
Hegyi H
Farkas K
Tordai H
Kozma E
Bányai L
Patthy L
Related articles/pages
on Google

on Google Scholar

on PubMed

Tools:

Post to:

Research article

Identification and correction of abnormal, incomplete and mispredicted proteins in public databases

Alinda Nagy , Hédi Hegyi , Krisztina Farkas , Hedvig Tordai , Evelin Kozma , László Bányai and László Patthy

Institute of Enzymology, Biological Research Center, Hungarian Academy of Sciences, H-1113 Budapest, Hungary

author email corresponding author email

BMC Bioinformatics 2008, 9:353doi:10.1186/1471-2105-9-353


Published:	27 August 2008

Additional files

Additional file 1:

Comments on entries identified by MisPred routines as suspicious and detailed description of Conflict 4. The file describes detailed analyses and comments of the entries identified as suspicious by the different MisPred routines, and contains the detailed description of the procedure of the identification of suspicious sequences by Conflict 4.

Format: PDF Size: 206KB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional file 2:

List of erroneous Swiss-Prot sequences identified by MisPred. The file contains the list of erroneous Swiss-Prot sequences identified by MisPred.

Format: PDF Size: 87KB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional file 3:

List of extracellular Pfam-A domain families. The file contains the list of extracellular Pfam-A domain families.

Format: PDF Size: 114KB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional file 4:

List of intracellular Pfam-A signaling domain families. The file contains the list of intracellular Pfam-A signaling domain families.

Format: PDF Size: 102KB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional file 5:

List of nuclear Pfam-A domain families. The file contains the list of nuclear Pfam-A domain families.

Format: PDF Size: 104KB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional file 6:

List of Pfam-A domain families suitable for the study of domain integrity. The file contains the list of Pfam-A domain families suitable for the study of domain integrity.

Format: PDF Size: 173KB Download file

This file can be viewed with: Adobe Acrobat Reader