Methodology article

Alignment of protein structures in the presence of domain motions

Roberto Mosca^1,³, Barbara Brannetti^1,⁴ and Thomas R Schneider^1,^2,³^*

¹ IFOM, the FIRC Institute for Molecular Oncology Foundation, Via Adamello 16, 20139, Milan, Italy

² European Institute of Oncology, Via Ripamonti 435, 20141, Milan, Italy

³ European Molecular Biology Laboratory Hamburg Outstation c/o DESY, Notkestraße 85, 22607, Hamburg, Germany

⁴ Novartis Pharma AG, CH-4056 Basel, Switzerland

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BMC Bioinformatics 2008, 9:352 doi:10.1186/1471-2105-9-352

Published: 27 August 2008

Additional file 1:

Comparison between DALI and RAPIDO on the human kinase structures dataset.

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Additional file 2:

results on Fischer's dataset.

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Additional file 3:

List of the structures included in the Dataset of human kinase structures.

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