A statistical toolbox for metagenomics: assessing functional diversity in microbial communities
-
* Corresponding author: Patrick D Schloss pschloss@microbio.umass.edu
BMC Bioinformatics 2008, 9:34 doi:10.1186/1471-2105-9-34
Accesses
- Last 30 days: 134 accesses
- Last 365 days: 1659 accesses
- All time: 8567 accesses
Cited by
BioMed Central: 4 citations
|
Software
WebMGA: a customizable web server for fast metagenomic sequence analysis Sitao Wu, Zhengwei Zhu, Liming Fu, Beifang Niu, Weizhong Li BMC Genomics 2011, 12:444 (7 September 2011) |
|
Research article
Analysis of intra-genomic GC content homogeneity within prokaryotes Jon Bohlin, Lars Snipen, Simon P Hardy, Anja B Kristoffersen, Karin Lagesen, Torunn Dønsvik, Eystein Skjerve, David W Ussery BMC Genomics 2010, 11:464 (6 August 2010) |
|
Methodology article
Microbial comparative pan-genomics using binomial mixture models Lars Snipen, Trygve Almøy, David W Ussery BMC Genomics 2009, 10:385 (19 August 2009) Pan-genomes encompass all genes found within a given taxa, and a new approach to estimating their size, applied to 16 bacterial species, gives results ranging from around 2600 gene families in Buchnera aphidicola to around 43000 in Escherichia coli.
|
|
Research article
Comparative metagenomics of Daphnia symbionts Weihong Qi, Guang Nong, James F Preston, Frida Ben-Ami, Dieter Ebert BMC Genomics 2009, 10:172 (21 April 2009) This article is part of a collection on Daphnia: the companion... |