Additional File 3.
TO scores versus scores generated using vector -based measures. For every gene pair in the 100 k set of gene pairs, the term overlap was calculated and plotted against the scores generated by Cosine, Kappa, and Weighted Cosine measures.
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Mistry and Pavlidis BMC Bioinformatics 2008 9:327 doi:10.1186/1471-2105-9-327