PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationships
-
* Corresponding authors: Cuong Than cvthan@cs.rice.edu - Luay Nakhleh nakhleh@cs.rice.edu
- † Equal contributors
BMC Bioinformatics 2008, 9:322 doi:10.1186/1471-2105-9-322
Accesses
- Last 30 days: 66 accesses
- Last 365 days: 757 accesses
- All time: 4040 accesses
Cited by
BioMed Central: 6 citations
|
Methodology article
Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests Sophie S Abby, Eric Tannier, Manolo Gouy, Vincent Daubin BMC Bioinformatics 2010, 11:324 (15 June 2010) |
|
Research article
FPGA acceleration of the phylogenetic likelihood function for Bayesian MCMC inference methods Stephanie Zierke, Jason D Bakos BMC Bioinformatics 2010, 11:184 (12 April 2010) |
|
Software
SPRIT: Identifying horizontal gene transfer in rooted phylogenetic trees Tobias Hill, Karl JV Nordström, Mikael Thollesson, Tommy M Säfström, Andreas KE Vernersson, Robert Fredriksson, Helgi B Schiöth BMC Evolutionary Biology 2010, 10:42 (13 February 2010) |
|
Review
Prokaryotic evolution and the tree of life are two different things Eric Bapteste, Maureen A O'Malley, Robert G Beiko, Marc Ereshefsky, J Peter Gogarten, Laura Franklin-Hall, François-Joseph Lapointe, John Dupré, Tal Dagan, Yan Boucher, William Martin Biology Direct 2009, 4:34 (29 September 2009) This article is part of a collection on Evolutionary Biology 150... From philosophical, scientific and epistemological perspectives, we argue that the tree of life can not successfully account for prokaryotic evolution, and we briefly set out alternative models to study their evolution.
|
|
Correspondence
Extended Newick: it is time for a standard representation of phylogenetic networks Gabriel Cardona, Francesc Rosselló, Gabriel Valiente BMC Bioinformatics 2008, 9:532 (15 December 2008) |