Additional file 2.

Compendium data. The files containing the compendium data for the comparative meta-analysis. DatasetInfo.txt: This file defines the datasets and contains the entrez gene ids of the up and down regulated genes as well as some meta-info. Entries in this file are tab-separated and provides per dataset the following info: the dataset ID, species, a platform ID and on a newlines the the entrez gene IDs for the up and down regulated genes. PlatformInfo.txt: This file provides information about the platforms used for the experiments. The entrez gene ids of all the checked genes are included. Entries in this file are platformIDs (correspond to those mentioned in DatasetInfo) followed by tab separated Entrez gene IDs.

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Jelier et al. BMC Bioinformatics 2008 9:291   doi:10.1186/1471-2105-9-291