BMC Bioinformatics

official impact factor 3.03

Open Access Research article

The combination approach of SVM and ECOC for powerful identification and classification of transcription factor

Guangyong Zheng1,2,3, Ziliang Qian3,6, Qing Yang2, Chaochun Wei4,5, Lu Xie5, Yangyong Zhu2,5* and Yixue Li4,5*

Author Affiliations

1 School of Life Sciences, Fudan University, 220 Handan Road, Shanghai 200433, PR China

2 Department of Computing and Information Technology, Fudan University, 220 Handan Road, Shanghai 200433, PR China

3 Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, Shanghai 200031, PR China

4 College of Life Sciences and Technology, Shanghai Jiaotong University, 800 Dongchuan Road, Shanghai 200240, PR China

5 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235, PR China

6 Graduate School of the Chinese Academy of Sciences, 19 Yuquan Road, Beijing 100039, PR China

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BMC Bioinformatics 2008, 9:282 doi:10.1186/1471-2105-9-282

Published: 16 June 2008

Additional files

Additional file 1:

Swiss-Prot accession number of non-redundant training datasets. Accession number of Swiss-Prot for 450 TFs and 1727 non-TFs were included in the file. Class information for 138 TFs was also provided.

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Open Data