Scipio: Using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related species

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Oliver Keller¹ , Florian Odronitz² , Mario Stanke³ , Martin Kollmar² and Stephan Waack¹

¹Universität Göttingen, Institut für Informatik, Lotzestr. 16-18, 37083 Göttingen, Germany

²Max-Planck-Institut für Biophysikalische Chemie, Abteilung NMR-basierte Strukturbiologie, Am Fassberg 11, 37077 Göttingen, Germany

³Universität Göttingen, Institut für Mikrobiologie und Genetik, Abteilung Bioinformatik, Goldschmidtstr. 1, 37077 Göttingen, Germany

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BMC Bioinformatics 2008, 9:278doi:10.1186/1471-2105-9-278


Published:	13 June 2008

Additional file 1:

Source code of the software, two Scipio output conversion tools, and a manual on the usage of the Scipio script.

Format: ZIP Size: 33KB Download file