BMC Bioinformatics

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Open Access Software

Predikin and PredikinDB: a computational framework for the prediction of protein kinase peptide specificity and an associated database of phosphorylation sites

Neil FW Saunders1*, Ross I Brinkworth1, Thomas Huber1, Bruce E Kemp2 and Bostjan Kobe1,3*

Author Affiliations

1 School of Molecular and Microbial Sciences, University of Queensland, Brisbane 4072, Australia

2 St. Vincent's Institute, 41 Victoria Pd, Fitzroy, 3065 Victoria, Australia

3 Institute for Molecular Bioscience and Special Research Centre for Functional and Applied Genomics, University of Queensland, Brisbane 4072, Australia

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BMC Bioinformatics 2008, 9:245 doi:10.1186/1471-2105-9-245

Published: 26 May 2008

Additional files

Additional file 1:

(Table 5) – kinase families common to NetPhosK, KinasePhos, GPS, PPSP, Scansite and linked to known phosphorylation sites in PredikinDB. Kinase names listed are as defined by each program.

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Open Data