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Discovery and assembly of repeat family pseudomolecules from sparse genomic sequence data using the Assisted Automated Assembler of Repeat Families (AAARF) algorithm

Jeremy D DeBarry, Renyi Liu and Jeffrey L Bennetzen*

BMC Bioinformatics 2008, 9:235 doi:10.1186/1471-2105-9-235

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The DAWGPAWS pipeline for the annotation of genes and transposable elements in plant genomes

James C Estill, Jeffrey L Bennetzen Plant Methods 2009, 5:8 (19 June 2009)

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