  Research articleStudying the functional conservation of cis-regulatory modules and their transcriptional outputDenis C Bauer Institute for Molecular Bioscience, University of Queensland, Brisbane, Qld. 4072 Australia
BMC Bioinformatics 2008, 9:220doi:10.1186/1471-2105-9-220
Additional filesAdditional file 1: Comparison of parameters from different models. Table containing the parameters for the TFs after training was performed. Format: PDF Size: 50KB Download file This file can be viewed with: Adobe Acrobat Reader Additional file 2: Comparison of TFBS-maps in predicted MSE2 regions. Table containing a visualization of the TFBS-maps from the predicted MSE2 regions using our predictor. Format: PDF Size: 46KB Download file This file can be viewed with: Adobe Acrobat Reader Additional file 3: Comparison of TFBS-maps in homologous MSE2 regions. Table containing a visualization of the TFBS-maps from homologous MSE2 regions. Format: PDF Size: 46KB Download file This file can be viewed with: Adobe Acrobat Reader Additional file 4: Sequence conservation of homologous MSE2s. Multiple alignment of the homologous MSE2 region in the eight different Drosophila species. Format: TXT Size: 27KB Download file Additional file 5: The Reinitz model and PWMs. Additional detail on the Reinitz model. Format: PDF Size: 72KB Download file This file can be viewed with: Adobe Acrobat Reader Additional file 6: Count matrices and logos of the used TFs. Table containing the count matrices and logos of the TFs used in this study. Format: PDF Size: 44KB Download file This file can be viewed with: Adobe Acrobat Reader |
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