Database  

MeInfoText 2.0: gene methylation and cancer relation extraction from biomedical literature

Yu-Ching Fang, Po-Ting Lai, Hong-Jie Dai, Wen-Lian Hsu BMC Bioinformatics 2011, 12:471 (14 December 2011)

Abstract | Full text | PDF | PubMed

Research  

Event extraction for DNA methylation

Tomoko Ohta, Sampo Pyysalo, Makoto Miwa, Jun’ichi Tsujii Journal of Biomedical Semantics 2011, 2(Suppl 5):S2 (6 October 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Database  

Text-mining of PubMed abstracts by natural language processing to create a public knowledge base on molecular mechanisms of bacterial enteropathogens

Sam Zaremba, Mila Ramos-Santacruz, Thomas Hampton, Panna Shetty, Joel Fedorko, Jon Whitmore, John M Greene, Nicole T Perna, Jeremy D Glasner, Guy Plunkett, Matthew Shaker, David Pot BMC Bioinformatics 2009, 10:177 (10 June 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Database  

TCMGeneDIT: a database for associated traditional Chinese medicine, gene and disease information using text mining

Yu-Ching Fang, Hsuan-Cheng Huang, Hsin-Hsi Chen, Hsueh-Fen Juan BMC Complementary and Alternative Medicine 2008, 8:58 (14 October 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Review  

Linking genes to literature: text mining, information extraction, and retrieval applications for biology

Martin Krallinger, Alfonso Valencia, Lynette Hirschman Genome Biology 2008, 9(Suppl 2):S8 (1 September 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central