BMC Bioinformatics

official impact factor 3.03
Search for
Advanced search
BMC Bioinformatics
Tools
Share this article
Open Access Highly Access

Major copy proportion analysis of tumor samples using SNP arrays

Cheng Li*, Rameen Beroukhim, Barbara A Weir, Wendy Winckler, Levi A Garraway, William R Sellers and Matthew Meyerson

BMC Bioinformatics 2008, 9:204 doi:10.1186/1471-2105-9-204

Accesses  

  • Last 30 days: 53 accesses
  • Last 365 days: 604 accesses
  • All time: 3907 accesses

Cited by

BioMed Central: 3 citations

Method   Open Access

Allele-specific copy number analysis of tumor samples with aneuploidy and tumor heterogeneity

Markus Rasmussen, Magnus Sundström, Hanna Kultima, Johan Botling, Patrick Micke, Helgi Birgisson, Bengt Glimelius, Anders Isaksson Genome Biology 2011, 12:R108 (24 October 2011)

Abstract | Full text | PDF | PubMed |  Editor’s summary

TAPS is a method for identifying allele-specific copy number changes in tumor samples

Research article   Open Access

A new analysis tool for individual-level allele frequency for genomic studies

Hsin-Chou Yang, Hsin-Chi Lin, Mei-Chu Huang, Ling-Hui Li, Wen-Harn Pan, Jer-Yuarn Wu, Yuan-Tsong Chen BMC Genomics 2010, 11:415 (5 July 2010)

Abstract | Full text | PDF | PubMed

Method   Open Access Highly Accessed

Segmentation-based detection of allelic imbalance and loss-of-heterozygosity in cancer cells using whole genome SNP arrays

Johan Staaf, David Lindgren, Johan Vallon-Christersson, Anders Isaksson, Hanna Göransson, Gunnar Juliusson, Richard Rosenquist, Mattias Höglund, Åke Borg, Markus Ringnér Genome Biology 2008, 9:R136 (16 September 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

A strategy is presented for detection of loss-of-heterozygosity and allelic imbalance in cancer cells from whole genome SNP genotyping data.

Google Scholar: View citations

ISI Web of Science: View citations

PubMed Central: View citations