Table 4 |
||||||||
|
The prediction of location of proteins in our datasets using various methods. Our dataset have 252 secretory and 252 non-secretory. The values in bracket shows total number of proteins on which a method was applied. |
||||||||
|
Subcellular Location |
PA-SUB |
WoLF PSORT |
TargetP |
PlasmoHT |
||||
|
|
||||||||
|
NSeca (250) |
Secb (252) |
NSec (250) |
Sec (250) |
NSec (252) |
Sec (251) |
Nsec (102) |
Sec (246) |
|
|
|
||||||||
|
Nuclear |
36 |
11 |
26 |
23 |
-- |
-- |
-- |
-- |
|
Plasma Membrane |
0 |
1 |
20 |
67 |
-- |
-- |
-- |
-- |
|
Extracellular |
48 |
12 |
36 |
22 |
92 |
163 |
3 |
146 |
|
Cytosol |
89 |
15 |
98 |
48 |
-- |
-- |
-- |
-- |
|
Others |
42 |
12 |
70 |
82 |
-- |
-- |
-- |
-- |
|
NSec |
-- |
-- |
-- |
-- |
160 |
89 |
98 |
100 |
|
No Prediction |
45 |
206 |
-- |
-- |
-- |
-- |
-- |
-- |
|
|
||||||||
|
aNsec: Non-secretory proteins; bSec: Secretory proteins |
||||||||
|
Verma et al. BMC Bioinformatics 2008 9:201 doi:10.1186/1471-2105-9-201 |
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