Table 1

The performance of SVM models using amino acids and dipeptides composition. The values in bold shows
Thr
 Amino acids composition
 Dipeptides composition


Sn
 Sp
 Acc
 MCC
 Sn
 Sp
 Acc
 MCC
-1.0
 94.84
 27.60
 61.35
 0.30
 98.81
 0.80
 50.00
 0.00
-0.9
 93.25
 33.20
 63.35
 0.33
 98.02
 3.20
 50.80
 0.04
-0.8
 92.86
 37.60
 65.34
 0.37
 96.83
 4.00
 50.60
 0.02
-0.7
 90.48
 43.20
 66.93
 0.38
 95.63
 7.20
 51.59
 0.06
-0.6
 89.29
 48.00
 68.73
 0.41
 94.44
 12.40
 53.59
 0.12
-0.5
 88.89
 58.40
 73.71
 0.50
 92.86
 27.20
 60.16
 0.27
-0.4
 87.70
 65.60
 76.69
 0.55
 88.49
 49.60
 69.12
 0.41
-0.3
 86.90
 72.00
 79.48
 0.60
 83.33
 73.20
 78.29
 0.57
-0.2
 85.71
 78.00
 81.87
 0.64
 82.14
 84.00
 83.07
 0.66
-0.1
 85.32
 80.80
 83.07
 0.66
 80.56
 88.80
 84.66
 0.70
0.0
 83.33
 84.00
 83.67
 0.67
 80.16
 92.00
 86.06
 0.73
0.1
 81.75
 85.20
 83.47
 0.67
 78.57
94.40
 86.45
 0.74
0.2
 80.56
 86.00
 83.27
 0.67
 76.98
 96.00
 86.45
 0.74
0.3
 79.76
 89.60
 84.66
 0.70
 74.21
 97.20
 85.66
 0.73
0.4
 78.97
 92.40
 85.66
 0.72
 69.84
 97.20
 83.47
 0.70
0.5
 77.78
 93.20
 85.46
 0.72
 63.10
 97.20
 80.08
 0.64
0.6
 76.98
 94.40
 85.66
 0.72
 57.94
 98.00
 77.89
 0.61
0.7
 76.19
 95.60
 85.86
 0.72
 52.72
 98.40
 75.50
 0.57
0.8
 73.02
 96.00
 84.46
 0.71
 44.05
 98.40
 71.12
 0.51
0.9
 70.24
 96.40
 83.27
 0.69
 33.73
 98.80
 66.14
 0.43
1.0
 65.48
 98.80
 82.07
 0.68
 24.21
 99.60
 61.75
 0.36

*Sn: Sensitivity; Sp: Specificity; Acc: Accuracy; MCC: Mathews Correlation Coefficient

Verma et al. BMC Bioinformatics 2008 9:201   doi:10.1186/1471-2105-9-201