Table 3 |
|||||
|
The seventy top-scoring domain pairs with pw-score at most 0.01. |
|||||
|
ORIG domA |
ORIG domB |
LP_score |
pw_score |
iPFAM |
Witns |
|
|
|||||
|
7tm_1 |
IL8 |
1 |
0 |
0 |
80 |
|
AAA |
AAA |
1 |
0 |
1 |
36 |
|
AAA |
PCI |
1 |
0 |
0 |
18 |
|
Ank |
RHD |
1 |
0 |
1 |
0 |
|
Cpn60_TCP1 |
WD40 |
1 |
0 |
0 |
50 |
|
Cyclin_N |
Pkinase |
1 |
0 |
1 |
24 |
|
LSM |
LSM |
1 |
0 |
1 |
76 |
|
Pkinase |
zf-C2H2 |
1 |
0 |
0 |
22 |
|
Pkinase |
Pkinase |
1 |
0 |
1 |
60 |
|
Pkinase |
WD40 |
1 |
0 |
0 |
30 |
|
Proteasome |
Proteasome |
1 |
0 |
1 |
36 |
|
RNase_PH |
RNase_PH |
1 |
0 |
1 |
0 |
|
RNase_PH |
RNase_PH_C |
1 |
0 |
1 |
0 |
|
RRM_1 |
RRM_1 |
1 |
0 |
1 |
70 |
|
RRM_1 |
WD40 |
1 |
0 |
0 |
21 |
|
RRM_1 |
zf-C2H2 |
1 |
0 |
0 |
23 |
|
WD40 |
WD40 |
1 |
0 |
1 |
38 |
|
zf-C2H2 |
zf-C2H2 |
1 |
0 |
1 |
106 |
|
UQ_con |
zf-C3HC4 |
1 |
0.00001 |
1 |
17 |
|
Pkinase |
RRM_1 |
1 |
0.00002 |
0 |
16 |
|
TNF |
TNFR_c6 |
1 |
0.00002 |
1 |
16 |
|
GTP_CDC |
GTP_CDC |
1 |
0.00003 |
0 |
15 |
|
Homeobox |
Pkinase |
1 |
0.00003 |
0 |
15 |
|
GDI |
Ras |
1 |
0.00006 |
1 |
14 |
|
PCI |
PCI |
1 |
0.00006 |
0 |
14 |
|
TPR |
zf-C2H2 |
1 |
0.00006 |
0 |
14 |
|
LSM |
WD40 |
1 |
0.00012 |
0 |
13 |
|
Metallophos |
Proteasome |
1 |
0.00012 |
0 |
13 |
|
AAA |
WD40 |
1 |
0.00024 |
0 |
12 |
|
HLH |
HLH |
1 |
0.00024 |
1 |
12 |
|
Ras |
Yip1 |
1 |
0.00024 |
0 |
12 |
|
WD40 |
zf-C2H2 |
1 |
0.00024 |
0 |
12 |
|
Hrf1 |
Ras |
1 |
0.00049 |
0 |
11 |
|
Metallophos |
efhand |
1 |
0.00049 |
1 |
11 |
|
TPR |
WD40 |
1 |
0.00049 |
0 |
11 |
|
Brix |
WD40 |
1 |
0.00098 |
0 |
10 |
|
Homeobox |
Homeobox |
1 |
0.00098 |
1 |
10 |
|
Homeobox |
zf-C2H2 |
1 |
0.00098 |
0 |
10 |
|
HSP70 |
Pkinase |
1 |
0.00098 |
0 |
10 |
|
KH_1 |
WD40 |
1 |
0.00098 |
0 |
10 |
|
LSM |
RRM_1 |
1 |
0.00098 |
0 |
10 |
|
LSM |
Nop |
1 |
0.00098 |
0 |
10 |
|
Metallophos |
Pkinase |
1 |
0.00098 |
0 |
10 |
|
PCI |
Proteasome |
1 |
0.00098 |
0 |
10 |
|
AAA |
TPR |
1 |
0.00195 |
0 |
9 |
|
Ank |
Pkinase |
1 |
0.00195 |
1 |
9 |
|
Chitin_bind_4 |
Chitin_bind_4 |
1 |
0.00195 |
0 |
9 |
|
E2F_TDP |
SUPRDOM8 |
1 |
0.00195 |
0 |
9 |
|
HSP70 |
WD40 |
1 |
0.00195 |
0 |
9 |
|
KH_1 |
RRM_1 |
1 |
0.00195 |
0 |
9 |
|
LSM |
zf-C2H2 |
1 |
0.00195 |
0 |
9 |
|
PH |
Pkinase |
1 |
0.00195 |
0 |
9 |
|
Pkinase |
Rad50_zn_hook |
1 |
0.00195 |
0 |
9 |
|
Pkinase |
efhand |
1 |
0.00195 |
0 |
9 |
|
Pkinase |
TPR |
1 |
0.00195 |
0 |
9 |
|
Histone |
WD40 |
1 |
0.00391 |
0 |
8 |
|
Pkinase |
Ras |
1 |
0.00391 |
0 |
8 |
|
zf-C3HC4 |
zf-C3HC4 |
1 |
0.00391 |
0 |
8 |
|
HATPase_c |
HATPase_c |
1 |
0.005 |
1 |
1 |
|
SNARE |
SNARE |
1 |
0.005 |
1 |
1 |
|
efhand |
efhand |
1 |
0.00781 |
1 |
7 |
|
Homeobox |
WD40 |
1 |
0.00781 |
0 |
7 |
|
PP2C |
Pkinase |
1 |
0.00781 |
0 |
7 |
|
RRM_1 |
TPR |
1 |
0.00781 |
0 |
7 |
|
Zn_clus |
Zn_clus |
1 |
0.00781 |
1 |
7 |
|
HSP90 |
Pkinase |
0.999 |
0 |
0 |
0 |
|
RHD |
RHD |
0.999 |
0 |
1 |
0 |
|
RHD |
TIG |
0.999 |
0 |
1 |
0 |
|
TIG |
TIG |
0.999 |
0 |
1 |
0 |
|
KE2 |
Prefoldin |
0.999 |
0.00098 |
1 |
10 |
|
|
|||||
|
Guimarães and Przytycka BMC Bioinformatics 2008 9:171 doi:10.1186/1471-2105-9-171 |
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