A comprehensive re-analysis of the Golden Spike data: Towards a benchmark for differential expression methods

Richard D Pearson

School of Computer Science, University of Manchester, Oxford Road, Manchester, M13 9PL, UK

author email corresponding author email

BMC Bioinformatics 2008, 9:164doi:10.1186/1471-2105-9-164


Published:	26 March 2008

Additional files

Additional file 1:

Source code used to create this paper and AffyDEComp. This is a zip file containing R and Sweave code. Sweave code is a text document which contains both LaTeX and R code, and as such can be used to recreate exactly all the results in this paper using open source tools. Also included is R code to recreate all the charts available through AffyDEComp. See the README file for further details.

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