Empirical Bayes models for multiple probe type microarrays at the probe level

doi:10.1186/1471-2105-9-156

BMC Bioinformatics

Volume 9

Viewing options:

Abstract
Full text
PDF (817KB)
Additional files

Associated material:

Related literature:

Articles citing this article
on BioMed Central
on Google Scholar
on ISI Web of Science
on PubMed Central
Other articles by authors
on Google Scholar

Åstrand M
Mostad P
Rudemo M

on PubMed

Åstrand M
Mostad P
Rudemo M
Related articles/pages
on Google

on Google Scholar

on PubMed

Tools:

Post to:

Methodology article

Empirical Bayes models for multiple probe type microarrays at the probe level

Magnus Åstrand , Petter Mostad and Mats Rudemo

Mathematical Sciences, Chalmers University of Technology, and Mathematical Sciences, Göteborg University, S-41296, Göteborg, Sweden

author email corresponding author email

BMC Bioinformatics 2008, 9:156doi:10.1186/1471-2105-9-156


Published:	20 March 2008

Additional files

Additional file 1:

Parameter estimation details. A detailed description of the parameter estimation procedure.

Format: PDF Size: 72KB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional file 2:

R-code and package information. The R-code used for each of the methods compared together with information about used R-packages (names and versions).

Format: TXT Size: 14KB Download file

Additional file 3:

ROC curves for all methods. Figures with ROC curves for all methods compared for each of the five data sets.

Format: PDF Size: 1.6MB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional file 4:

ROC curve AUC for all methods. Tables with ROC curve AUC up to 25, 50, 100, 200 false positives for all methods compared for each of the five data sets.

Format: PDF Size: 28KB Download file

This file can be viewed with: Adobe Acrobat Reader