Figure 2.

Posterior probabilities of correctly predicting secondary structure types with stochastic pairwise alignment methods as a function of alignment posterior probabilities. The black diagonal shows the identity function. The statistics have been generated on the whole HOMSTRAD database, 'Viterbi' means estimation based on a single, optimal alignment obtained by the Viterbi algorithm, 'Forward' means estimation based on the posterior distribution of alignments obtained by the Forward algorithm.

Mikl√≥s et al. BMC Bioinformatics 2008 9:137   doi:10.1186/1471-2105-9-137
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