Table 5 |
|||||
|
Descriptions of the nine microarray data sets used in our analysis. |
|||||
|
Data set |
Full Dim. |
Used Dim. |
Category |
Organism |
Expression Profiles |
|
|
|||||
|
Alizadeh (ALI) |
13412 × 40 |
5635 × 40 |
multiple exposure |
H. sapiens |
diffuse large B-cell lymphoma |
|
Alon (ALO) |
2000 × 62 |
2000 × 62 |
multiple exposure |
H. sapiens |
colon cancer and normal colon tissue |
|
Baldwin (BAL) |
16814 × 39 |
6838 × 39 |
time series, non-cyclic |
H. sapiens |
epithelial cellular response to L. monocytogenes |
|
Causton (CAU) |
4682 × 45 |
4616 × 45 |
multiple exposure × time series |
S. cerevisiae |
response to changes in extracellular environment |
|
Gasch (GAS) |
6152 × 174 |
2986 × 155 |
multiple exposure × time series |
S. cerevisiae |
cellular response to DNA-damaging adgents |
|
Golub (GOL) |
7129 × 72 |
1994 × 72 |
multiple exposure |
H. sapiens |
acute lymphoblastic leukemia |
|
Ross (ROS) |
9706 × 60 |
2266 × 60 |
multiple exposure |
H. sapiens |
NCI60 cancer cell lines |
|
Spellman, AFA (SP.AFA) |
7681 × 18 |
4480 × 18 |
time series, cyclic |
S. cerevisiae |
cell-cycle genes |
|
Spellman, ELU (SP.ELU) |
7681 × 14 |
5766 × 14 |
time series, cyclic |
S. cerevisiae |
cell-cycle genes |
|
|
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|
Brock et al. BMC Bioinformatics 2008 9:12 doi:10.1186/1471-2105-9-12 |
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