Table 7 |
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|
Semantic role types and their annotation instances |
||
|
clueLoc |
clueTime |
clueExperiment |
|
|
||
|
nuclear (135) |
early (15) |
electrophoretic mobility shift assays (13) |
|
in t cells (106) |
subsequent (13) |
northern blot analysis (9) |
|
in human monocytes (57) |
during t-cell activation (8) |
electrophoretic mobility shift assay (7) |
|
in monocytes (50) |
within 30 min (6) |
by electrophoretic mobility shift assays (7) |
|
in b cells (41) |
initial (6) |
using electrophoretic mobility shift assays (4) |
|
intracellular (38) |
during aging (6) |
in transient transfection assays (4) |
|
in jurkat cells (34) |
during monocytic differentiation (5) |
in emsas (4) |
|
in jurkat t cells (33) |
simultaneous (4) |
in electrophoretic mobility shift assays (4) |
|
in monocytic cells (30) |
during the immune response. (4) |
site-directed mutagenesis (3) |
|
in t lymphocytes (28) |
during erythroid differentiation (4) |
nuclear run-on experiments (3) |
|
surface (27) |
at 24 hr (4) |
in gel mobility shift assays (3) |
|
cells (24) |
rapidly (3) |
immunoblot analysis (3) |
|
cytoplasmic (21) |
for 6 hours (3) |
gel-shift analysis (3) |
|
in these cells (20) |
for 6 h (3) |
emsa (3) |
|
in human t cells (20) |
first (3) |
cotransfection experiments (3) |
|
t cells (18) |
during the immune response (3) |
by northern blot analysis (3) |
|
cellular (18) |
during the cell cycle (3) |
by flow cytometry (3) |
|
in activated t cells (17) |
during t cell activation (3) |
by electrophoretic mobility shift assay (3) |
|
to the nucleus (16) |
during myelopoiesis (3) |
western blotting (2) |
|
in the nucleus (16) |
during monocyte differentiation (3) |
transient transfection experiments (2) |
|
in hela cells (16) |
at 8 hr (3) |
supershift analysis (2) |
|
in thp-1 cells (15) |
24 h (3) |
rt-pcr (2) |
|
in b lymphocytes (15) |
within 8 hr of infection (2) |
northern blot analyses (2) |
|
b cell (15) |
within 6 h (2) |
northern analysis (2) |
|
in u937 cells (14) |
within 4 hours (2) |
mutational analysis (2) |
|
in fibroblasts (13) |
within 20 min (2) |
mutational analyses (2) |
|
b cells (13) |
within 2 h (2) |
mobility shift assays (2) |
|
transendothelial (12) |
second (2) |
inhibition studies (2) |
|
t-cell (12) |
in a primary t cell response (2) |
in transient transfection experiments (2) |
|
into the nucleus (12) |
from day 7 to day 14 of culture (2) |
in transient assays (2) |
|
... |
... |
... |
|
|
||
|
Text expressions providing locational (clueLoc), temporal (clueTime) and experimental (clueExperiment) context where biological events take place. The 30 most frequently observed expressions for each type are listed. |
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|
Kim et al. BMC Bioinformatics 2008 9:10 doi:10.1186/1471-2105-9-10 |
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