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This article is part of the supplement: Proceedings of the Fourth Annual MCBIOS Conference. Computational Frontiers in Biomedicine .

Open AccessProceedings

Cloning, analysis and functional annotation of expressed sequence tags from the Earthworm Eisenia fetida

Mehdi Pirooznia1* email, Ping Gong2* email, Xin Guan2 email, Laura S Inouye3 email, Kuan Yang1 email, Edward J Perkins3 email and Youping Deng1 email

Department of Biological Sciences, University of Southern Mississippi, Hattiesburg, MS, 39406, USA

SpecPro Inc., 3909 Halls Ferry Rd, Vicksburg, MS, 39180, USA

Environmental Laboratory, U.S. Army Engineer Research and Development Center, 3909 Halls Ferry Rd, Vicksburg, MS, 39180, USA

author email corresponding author email* Contributed equally

BMC Bioinformatics 2007, 8(Suppl 7):S7doi:10.1186/1471-2105-8-S7-S7

Published: 1 November 2007

Additional files

Additional file 1:

A complete listing of significant blastx hits (E ≤ 10-5) of the 2231 unique Eisenia fetida EST sequences matching four model organisms Mus musculus, Drosophila melanogaster, Caenorhabditis elegans, and Saccharomyces cerevisiae.

Format: DOC Size: 798KB Download file

This file can be viewed with: Microsoft Word Viewer

Additional file 2:

A complete listing of 5129 GO terms for the 517 unique Eisenia fetida sequences with significant homology with 830 genes of the four model organisms.

Format: XLS Size: 783KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional file 3:

A complete listing of the KEGG pathways mapped for 157 unique Eisenia fetida sequences.

Format: DOC Size: 173KB Download file

This file can be viewed with: Microsoft Word Viewer


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