BMC Bioinformatics

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This article is part of the supplement: The Second Automated Function Prediction Meeting

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An improved method for identifying functionally linked proteins using phylogenetic profiles

Shawn Cokus, Sayaka Mizutani and Matteo Pellegrini*

BMC Bioinformatics 2007, 8(Suppl 4):S7 doi:10.1186/1471-2105-8-S4-S7

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Steps toward broad-spectrum therapeutics: discovering virulence-associated genes present in diverse human pathogens

Chris J Stubben, Melanie L Duffield, Ian A Cooper, Donna C Ford, Jason D Gans, Andrey V Karlyshev, Bryan Lingard, Petra CF Oyston, Anna de Rochefort, Jian Song, Brendan W Wren, Rick W Titball, Murray Wolinsky BMC Genomics 2009, 10:501 (29 October 2009)

Methodology article   Open Access

Stratification of co-evolving genomic groups using ranked phylogenetic profiles

Shiri Freilich, Leon Goldovsky, Assaf Gottlieb, Eric Blanc, Sophia Tsoka, Christos A Ouzounis BMC Bioinformatics 2009, 10:355 (27 October 2009)

Research article   Open Access

Investigation of factors affecting prediction of protein-protein interaction networks by phylogenetic profiling

Anis Karimpour-Fard, Lawrence Hunter, Ryan T Gill BMC Genomics 2007, 8:393 (29 October 2007)

Introduction   Open Access

The 2006 Automated Function Prediction Meeting

Ana PC Rodrigues, Barry J Grant, Adam Godzik, Iddo Friedberg BMC Bioinformatics 2007, 8(Suppl 4):S1 (22 May 2007)