Table 2

Comparison of AGGRESCAN predictions with the structural composition of different amyloid fibrils.

Protein

Structure (β-strands)

Prediction

Reference


Aβ1-40

β 1: 12–24

17–22

[78]

β 2: 30–40

30–40

Amylin

β 1: 12–17

13–18

[79]

β 2: 22–27

24–28

β 3: 31–37

-

[80]

HET's Prion

β 1: 226–234

-

β 2: 237–245

238–248

β 3: 262–270

263–267

β 4: 273–282

272–276

Mouse Prion (89–143)

β 1: 112–124

115–129

[81]

β2- microglobulin (20–41)

β 1: 21–30

22–30

[82]

β 2: 33–40

-

Transthyretin (105–115)

β 1: 105–115

105–112

[83]


Conchillo-Solé et al. BMC Bioinformatics 2007 8:65   doi:10.1186/1471-2105-8-65

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