Table 3

Proportion of SDS selected by sampling methods


Total Blast set (*)
mm
sdm
sm
rm

Total number of sequences
121185
18518
16774
4696
36310
Number of SDS
-
7506
7694
1038
27748
SDS proportion (%)
0
41
46
22
76

* with more than 500 sequences detected by BlastP with E-value ≤ 0.001

Friedrich et al. BMC Bioinformatics 2007 8:62   doi:10.1186/1471-2105-8-62