Figure 7.

Breakdown of MUMmerGPU processing time. The stacked bar charts indicate the amount of time spent in each phase of the MUMmerGPU for the three test sets. Given a sufficiently large number of sequencing reads, the time spent building the suffix tree is small compared to time spent aligning queries.

Schatz et al. BMC Bioinformatics 2007 8:474   doi:10.1186/1471-2105-8-474
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